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WormBase Tree Display for Variation: WBVar00098230

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Name Class

WBVar00098230NamePublic_nameWBVar00098230
Other_namepas3089
cewivar00080122
F56D12.1a.2:c.-38T>A
HGVSgCHROMOSOME_II:g.1310072A>T
Sequence_detailsSMapS_parentSequenceF56D12
Flanking_sequencesaaatgagcttttaatcgatttaattcgataaaacgtggataaaaatgaataaaaattaatttacgacgttgggtctgctggactacaaactacaaaaaataattagcagaccgaaacgttttttcttgtcatttctcgttttttaagcaaaatttactgaagttttacgaattttagaaatttttcagcaaaataatattgaaaattcattaaaatatcaacaatttcgtaaaataaattgaatttctagaaaaacaaacaaataccgtataatttaaaggcgcatgttagaaaatagccataaggtctcacagcgagcagtacaaaaggaaacaaaacattttcgattttgaataatcctagttttttctggttttttgcagcatttgtcaccatttcacgcgaaaaaagaaacatttttatcagatagaaaagagaaaactgagacgttttaagtggctcagtgctcagtgagctccgagagaatcgatggcgccgaggattagagaaaacagggcgaaagcgcgctctgttgcacacagcggcttttctcgagtaccaactgccatggggcactccttgacaagaaaaagatgacca
Mapping_targetF56D12
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000112
TranscriptF56D12.1a.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF56D12.1a.2:c.-38T>A
cDNA_position62
Exon_number1/10
MethodWGS_Pasadena_Quinlan