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WormBase Tree Display for Variation: WBVar00098223

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Name Class

WBVar00098223NamePublic_nameWBVar00098223
Other_namepas3082
F56D12.1a.2:c.1475+6C>T
CE33403:p.Ala494Val
F56D12.1b.1:c.1481C>T
F56D12.1a.1:c.1475+6C>T
F56D12.1d.1:c.1055+6C>T
HGVSgCHROMOSOME_II:g.1307164G>A
Sequence_detailsSMapS_parentSequenceF56D12
Flanking_sequencescgagggtttttattggagaaattgtgtaattatcgtttttcgacattttttaacctattttgttcggttatagagaaatttcttgaaaattgccgaaaaaacagaatttcaagatttcgaattttccgggaataattttaaatcgacttttggcagttttcttgtgcctaaaatgttgaatttcagcatttttgaacataacaaacccgaaaattcgagtttttcttctttccgctgggtttttagataaaatttttgagtccctgaaaacctgtgcaaaaacttgtattttttgtagttccaacctataaaggaactccttatcctgcgaaaaaacggcgccagtcagcccataaggtgtcgcgtctttcacagtcgcgagcacctcatcaaccttcgaatcctcgtagaccagtaccgtcaccaccggtccgaacatttcctcagtgagaagcttgctcttcggatccgtcacagtgatcagggtcggctcgatgaagtatcccgttttgtcgtcacattttccgccgagcaccacatttgctccgtcggctccggttttcgcaaagtcaatgtaggccttgagcctggcaaacgcct
Mapping_targetF56D12
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004604From_analysisWGS_Pasadena_Quinlan
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
StatusLive
AffectsGeneWBGene00000112
TranscriptF56D12.1b.1 (12)
F56D12.1a.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScF56D12.1a.2:c.1475+6C>T
Intron_number8/9
F56D12.1a.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScF56D12.1a.1:c.1475+6C>T
Intron_number7/8
F56D12.1d.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScF56D12.1d.1:c.1055+6C>T
Intron_number3/3
MethodWGS_Pasadena_Quinlan