WormBase Tree Display for Variation: WBVar00097484
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WBVar00097484 | Name | Public_name | WBVar00097484 | ||
---|---|---|---|---|---|
Other_name | pas2343 | ||||
cewivar00072299 | |||||
Y54E10BR.7.1:c.639A>C | |||||
CE28995:p.Ser213= | |||||
HGVSg | CHROMOSOME_I:g.3042640T>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y54E10BR | |
Flanking_sequences | aataaaaaaccggaattagaactatgcaagtacgccctaataaaaatcaatactcacaaataatattcctctgacggagtggtcaatggtgtcccatttctagatattgtcacgttgaggtcatctgagcatctcggtgtattccacggattgccacatgacgcccacggaacttcggaatcccaaattttctgaaattttattgataaattgaacaattactgcgtggccttgatatacaaaaactcggccaccaattactttttgaaaaaattaaaaagagtgtcgtttggaacttac | gaaagtgaaacaatagcaaaatagacggcttgagcgatgatcgcattatagaaaatggctatgaacgtgcaaatacagcagataccgtaaccgattcctgaagaaaaattacgttttttttcggattatctgatgagataacttttgaccacctcaggctaaacctaagcttaatcccaaacctaagcctaagcctaagcgtaagcctaagcgtaagcctaagcgtgagcgtaagcctaagcctaagcctgagcctgagcctaaacctaagcccatgcctaagtctaagcctaagccgaa | |||
Mapping_target | Y54E10BR | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003387 | |||
Transcript | Y54E10BR.7.1 | VEP_consequence | splice_region_variant,synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y54E10BR.7.1:c.639A>C | ||||
HGVSp | CE28995:p.Ser213= | ||||
cDNA_position | 639 | ||||
CDS_position | 639 | ||||
Protein_position | 213 | ||||
Exon_number | 5/13 | ||||
Codon_change | tcA/tcC | ||||
Amino_acid_change | S | ||||
Method | WGS_Pasadena_Quinlan |