WormBase Tree Display for Variation: WBVar00095888
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| WBVar00095888 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00095888 | |||
| Other_name | pas747 | ||||
| cewivar00077336 | |||||
| CE51225:p.Pro31= | |||||
| C08G5.4b.1:c.297T>G | |||||
| CE46215:p.Pro99= | |||||
| CE34672:p.Pro207= | |||||
| C08G5.4a.1:c.621T>G | |||||
| C08G5.4c.1:c.93T>G | |||||
| HGVSg | CHROMOSOME_II:g.746661A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | C08G5 | |
| Flanking_sequences | caagatctgagccgttatagtttaaatatcgatgcaccatgtttgagaaaagaagagcttcaacctaccatagtgcctggtgcgatccttcgcgtgcaagtcacgagccttgattatggataccgtaatcttcccagaagttggcaagtagcacagggagatcatgatttctccacaggcgtcctagaaaatcagcttttgctaaaaattttggctctgcaaaaatcccaccttcgacacagttggtctttgcaaatgcttccagtaaaccgggctgctctcgaatttcacgtgcttcag | ggtaatagaatttctccaatcgggtcatccgacgagaacctatcgtaatccatcacctggagcactagagtcatgtcgtgaagtttcttcatcgagtgccctgaaaaaataaatttgagtgagaaatttgcacggtaaccctactacagtacaaaacctctatagtacctttacagtacccctaaagtcatataacagtatccctacagtaccccttgtagtgccacaacatcacttctacattacccctcgaatacccctacagtacctacagtaccctagagtgccctgaagtactcc | |||
| Mapping_target | C08G5 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (14) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01358573 | |||
| WBVar01292673 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004926 | |||
| Transcript | C08G5.4b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C08G5.4b.1:c.297T>G | ||||
| HGVSp | CE46215:p.Pro99= | ||||
| cDNA_position | 309 | ||||
| CDS_position | 297 | ||||
| Protein_position | 99 | ||||
| Exon_number | 3/6 | ||||
| Codon_change | ccT/ccG | ||||
| Amino_acid_change | P | ||||
| C08G5.4c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C08G5.4c.1:c.93T>G | ||||
| HGVSp | CE51225:p.Pro31= | ||||
| cDNA_position | 93 | ||||
| CDS_position | 93 | ||||
| Protein_position | 31 | ||||
| Exon_number | 1/3 | ||||
| Codon_change | ccT/ccG | ||||
| Amino_acid_change | P | ||||
| C08G5.4a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C08G5.4a.1:c.621T>G | ||||
| HGVSp | CE34672:p.Pro207= | ||||
| cDNA_position | 669 | ||||
| CDS_position | 621 | ||||
| Protein_position | 207 | ||||
| Exon_number | 6/9 | ||||
| Codon_change | ccT/ccG | ||||
| Amino_acid_change | P | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
