WormBase Tree Display for Variation: WBVar00095757
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| WBVar00095757 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00095757 | |||
| Other_name | pas616 | ||||
| haw16536 | |||||
| cewivar00076467 | |||||
| C09E8.3.1:c.1320A>G | |||||
| CE19349:p.Glu440= | |||||
| HGVSg | CHROMOSOME_II:g.550422A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C09E8 | |
| Flanking_sequences | aacatgcatcgtaaaatttgatactcttttgcattggcattcagaccaaaactataatactattatgaactatgttccctcaatcagaaatgtagttgagttgctaattagtgaattcagtggctctgcatcatattggctgagtagcgacttaacaaaactttcacgttccataagttttcaaatttatctacataaattgaatatatttttttttcaggaaaacgccacaaaaatcctgggaaacgaggaaaaatcaaaaatcgaagttttcgaggatctcgataagtcatacagtga | gagcaaaagaagaagcttaacgatgatggattcgcatttttgactgaaaaacaaatggaaagactctacggaaaggaaagcccgtacaagcatacaaaggcgttgaagaagttcaagagactgagagatgacccagagaaatatattgagaaggagtaagttgggattttttgagctataattttgtagtttggagcaaaattctgagtagtttagctccaaaaatttgtttctgaaactaggtcaaactacagtaatcctaagttttttccactacaaattttggtttaaaaaaaaact | |||
| Mapping_target | C09E8 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00163286 | |||
| WBVar01358141 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015646 | |||
| Transcript | C09E8.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C09E8.3.1:c.1320A>G | ||||
| HGVSp | CE19349:p.Glu440= | ||||
| cDNA_position | 1446 | ||||
| CDS_position | 1320 | ||||
| Protein_position | 440 | ||||
| Exon_number | 8/10 | ||||
| Codon_change | gaA/gaG | ||||
| Amino_acid_change | E | ||||
| Reference | WBPaper00037807 | ||||
| Method | WGS_Pasadena_Quinlan |
