WormBase Tree Display for Variation: WBVar00095459
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| WBVar00095459 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00095459 | |||
| Other_name | pas318 | ||||
| cewivar00017926 | |||||
| B0412.3e.1:c.163-385G>A | |||||
| B0412.3b.1:c.2428-385G>A | |||||
| B0412.3c.1:c.820-385G>A | |||||
| B0412.3a.1:c.3241-385G>A | |||||
| B0412.3d.1:c.190-385G>A | |||||
| HGVSg | CHROMOSOME_III:g.808943G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | B0412 | |
| Flanking_sequences | gttgtcttttttccttttcatgtttgcctgcatgatacatttatcattgcgcgattttcatccgagttcaaggtttttggttcttgtttggaggttatgaaaaaaaactaaatcgatattgaataaaaagaaaacattttcgttagtgaggaaattaccgaataatatggaagcttcggcaactaaagtggaataagtaaatttctataaaaaaaatgatcagcttttttttgaagttggaaattgcgtttttctagagtattattttttgcttaaacgagtagcttgttcgattaaagt | caaatatataaatggtttttggaaaataagcttttacttgtatcacacaaaaacaatattagagttgaattcatctgttgtgttttcttttgcaaactaactcaaatttttttgactcccttctaatatctatgtttcttatttaatttgagtagaatcattgacatgctcacaagacagattgacattcaaaaaagggaaatttaaatcaaggctatgaagttagttttcgatatatgttgttcctgaaatctagtgaaatcggaacttatttactcttactatgtcccaagtcgcaaa | |||
| Mapping_target | B0412 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (92) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01443289 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00015173 | |||
| Transcript | B0412.3e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.3e.1:c.163-385G>A | ||||
| Intron_number | 2/3 | ||||
| B0412.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.3c.1:c.820-385G>A | ||||
| Intron_number | 6/6 | ||||
| B0412.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.3b.1:c.2428-385G>A | ||||
| Intron_number | 12/12 | ||||
| B0412.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.3d.1:c.190-385G>A | ||||
| Intron_number | 3/3 | ||||
| B0412.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.3a.1:c.3241-385G>A | ||||
| Intron_number | 17/18 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
