WormBase Tree Display for Variation: WBVar00095431
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| WBVar00095431 | Name | Public_name | WBVar00095431 | ||
|---|---|---|---|---|---|
| Other_name | pas290 | ||||
| cewivar00017715 | |||||
| C24A1.2a.1:c.566-1191C>T | |||||
| C24A1.2b.1:c.563-1191C>T | |||||
| HGVSg | CHROMOSOME_III:g.712093C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C24A1 | |
| Flanking_sequences | ccaatcttaatggaaaagtggagcatttatcaccttcgtggtcgaaggtggctgggctaaagtttggttcttgttaccaagatctaaagtttgtgacgctgcttgaaaaacggatcctgatcccctgagcgccggagcgccggagcctaccctgtatggaagctcattatctcttctgtctgccaatccgttcaagagaaaaagccagtgaagtccgttttgctttcgatttctgatcgcccttcctccctttcgaattccctttcggattctcgtacggcaaaacggaagcagtaaaag | ggtttgtgtggcgccgtcgatccagtcgcactttttacgcgcgcgcacgtcttctgaatgtgttatgttaggcgccgccgggaaccagaggagaggacagtgaaagccgtgatgaggagagcgaaagttatatgcttcgtcgaacctcttctattattattattatagtttgattgttgttggtgtgatgttccatgtccggaacaactactgtcacctcttgagggaaggatccttttgaaagtttgggggttgcttgctcaaaagttcaaaaactttttgatagtaatgaaatatttt | |||
| Mapping_target | C24A1 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (139) | |||||
| Laboratory | QX | ||||
| AX | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01443212 | |||
| WBVar01255007 | |||||
| WBVar01389443 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016029 | |||
| Transcript | C24A1.2b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A1.2b.1:c.563-1191C>T | ||||
| Intron_number | 4/6 | ||||
| C24A1.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A1.2a.1:c.566-1191C>T | ||||
| Intron_number | 5/8 | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
