WormBase Tree Display for Variation: WBVar00095101
expand all nodes | collapse all nodes | view schema
WBVar00095101 | Evidence | Paper_evidence | WBPaper00006369 | ||
---|---|---|---|---|---|
Name | Public_name | oz240 | |||
Other_name (10) | |||||
HGVSg | CHROMOSOME_II:g.9748860C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y53C12B | |
Flanking_sequences | ggataccaacattctcgtcaaaattctaat | aaagctacaattcttctcaaagttatccac | |||
Mapping_target | Y53C12B | ||||
Type_of_mutation | Substitution | c | t | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Laboratory | BS | ||||
Status | Live | ||||
Affects | Gene | WBGene00003785 | |||
Transcript | Y53C12B.3e.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | Y53C12B.3e.1:c.1357C>T | ||||
HGVSp | CE54300:p.Gln453Ter | ||||
cDNA_position | 1357 | ||||
CDS_position | 1357 | ||||
Protein_position | 453 | ||||
Exon_number | 4/6 | ||||
Codon_change | Caa/Taa | ||||
Amino_acid_change | Q/* | ||||
Y53C12B.3d.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | Y53C12B.3d.1:c.1750C>T | ||||
HGVSp | CE54289:p.Gln584Ter | ||||
cDNA_position | 1750 | ||||
CDS_position | 1750 | ||||
Protein_position | 584 | ||||
Exon_number | 6/9 | ||||
Codon_change | Caa/Taa | ||||
Amino_acid_change | Q/* | ||||
Y53C12B.3b.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | Y53C12B.3b.1:c.1705C>T | ||||
HGVSp | CE18413:p.Gln569Ter | ||||
cDNA_position | 1724 | ||||
CDS_position | 1705 | ||||
Protein_position | 569 | ||||
Exon_number | 6/9 | ||||
Codon_change | Caa/Taa | ||||
Amino_acid_change | Q/* | ||||
Y53C12B.3c.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | Y53C12B.3c.1:c.1759C>T | ||||
HGVSp | CE54262:p.Gln587Ter | ||||
cDNA_position | 1910 | ||||
CDS_position | 1759 | ||||
Protein_position | 587 | ||||
Exon_number | 7/10 | ||||
Codon_change | Caa/Taa | ||||
Amino_acid_change | Q/* | ||||
Y53C12B.3a.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | Y53C12B.3a.1:c.1696C>T | ||||
HGVSp | CE19224:p.Gln566Ter | ||||
cDNA_position | 1728 | ||||
CDS_position | 1696 | ||||
Protein_position | 566 | ||||
Exon_number | 6/9 | ||||
Codon_change | Caa/Taa | ||||
Amino_acid_change | Q/* | ||||
Genetics | Interpolated_map_position | II | 1.70869 | ||
Reference | WBPaper00006369 | ||||
Method | Substitution_allele |