WormBase Tree Display for Variation: WBVar00094207

WBVar00094207 Name: Public_name: ok3129
    Other_name: Y105C5A.1.2:c.293_748+3del
      Y105C5A.1.1:c.293_748+3del
    HGVSg: CHROMOSOME_IV:g.15553959_15554417del
  Sequence_details: SMap: S_parent: Sequence: Y105C5A
    Flanking_sequences: tcgatattattccaaaagtcccctttaact cctctggcacttcttcattgtcgactacta
    Mapping_target: Y105C5A
    Type_of_mutation: Deletion
    PCR_product: ok3129_external
      ok3129_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032984
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00013632
    Transcript: Y105C5A.1.2 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y105C5A.1.2:c.293_748+3del
        cDNA_position: 383-?
        CDS_position: 293-?
        Protein_position: 98-?
        Intron_number: 3/6
        Exon_number: 3/7
      Y105C5A.1.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y105C5A.1.1:c.293_748+3del
        cDNA_position: 305-?
        CDS_position: 293-?
        Protein_position: 98-?
        Intron_number: 2/5
        Exon_number: 2/6
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele