WormBase Tree Display for Variation: WBVar00094174
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WBVar00094174 | Name | Public_name | ok3096 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_I:g.323783_324302delinsCAAA | ||||
Sequence_details | SMap | S_parent | Sequence | Y48G1A | |
Flanking_sequences | tgcgcacgacttgacgcgcaaacttcccaa | ggaaaagcgctctcggacattgaaaaatac | |||
Mapping_target | Y48G1A | ||||
Type_of_mutation | Insertion | CAAA | |||
Deletion | |||||
PCR_product | OK3096_external | ||||
OK3096_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037313 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00021660 | |||
Transcript | Y48G1A.4.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | ?-356 | ||||
CDS_position | ?-351 | ||||
Protein_position | ?-117 | ||||
Intron_number | 2-3/8 | ||||
Exon_number | 1-4/9 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |