WormBase Tree Display for Gene: WBGene00021660
expand all nodes | collapse all nodes | view schema
| WBGene00021660 | SMap | S_parent | Sequence | Y48G1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nol-14 | Person_evidence | WBPerson3772 | |||||
| WBPerson38007 | |||||||||
| Sequence_name | Y48G1A.4 | ||||||||
| Molecular_name | Y48G1A.4 | ||||||||
| Y48G1A.4.1 | |||||||||
| CE52674 | |||||||||
| Other_name | Y48G1A.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y48G1A.c | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y48G1A.e | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| NOP14 | |||||||||
| CELE_Y48G1A.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | nol-14 | ||||||||
| DB_info | Database | AceView | gene | 1A803 | |||||
| WormQTL | gene | WBGene00021660 | |||||||
| WormFlux | gene | WBGene00021660 | |||||||
| NDB | locus_tag | CELE_Y48G1A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021660|UniProtKB=Q9N3Q9 | |||||||
| family | PTHR23183 | ||||||||
| NCBI | gene | 171622 | |||||||
| RefSeq | protein | NM_001364065.4 | |||||||
| TREEFAM | TREEFAM_ID | TF105698 | |||||||
| TrEMBL | UniProtAcc | Q9N3Q9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3Q9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Aug 2017 12:58:54 | WBPerson2970 | Name_change | CGC_name | nol-14 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nol | ||||||||
| Allele (115) | |||||||||
| Strain | WBStrain00037313 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00093870 | ||||||||
| 00093871 | |||||||||
| 00093872 | |||||||||
| 00093873 | |||||||||
| 00093874 | |||||||||
| 00093875 | |||||||||
| 00093876 | |||||||||
| 00125931 | |||||||||
| Contained_in_operon | CEOP1968 | ||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in maturation of SSU-rRNA. Predicted to be located in nucleolus. Predicted to be part of Noc4p-Nop14p complex and small-subunit processome. Is an ortholog of human NOP14 (NOP14 nucleolar protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48G1A.4 | |||||||
| Corresponding_CDS_history | Y48G1A.4:wp265 | ||||||||
| Y48G1A.4a:wp83 | |||||||||
| Y48G1A.4b:wp83 | |||||||||
| Corresponding_transcript | Y48G1A.4.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf643008 | ||||||||
| WBsf655837 | |||||||||
| WBsf655838 | |||||||||
| WBsf982467 | |||||||||
| WBsf982468 | |||||||||
| WBsf217119 | |||||||||
| WBsf217120 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Expr1010973 | ||||||||
| Expr1039482 | |||||||||
| Expr1160382 | |||||||||
| Expr2007679 | |||||||||
| Expr2025921 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (170) | |||||||||
| Map_info | Map | I | Position | -19.0759 | |||||
| Positive | Positive_clone | Y48G1A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029435 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00064934 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
