WormBase Tree Display for Variation: WBVar00093842

WBVar00093842 Name: Public_name: ok2742
    Other_name: F57H12.3.1:c.105_416del
      CE17124:p.Cys36_Leu139del
    HGVSg: CHROMOSOME_IV:g.7978303_7978614del
  Sequence_details: SMap: S_parent: Sequence: F57H12
    Flanking_sequences: actacaaacattccagcgtccaccaccacc gaagaaattccaagaattcaaagagaaaaa
    Mapping_target: F57H12
    Type_of_mutation: Deletion
    PCR_product: ok2742_external
      ok2742_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032760
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00003879
    Transcript: F57H12.3.1 VEP_consequence: inframe_deletion
        VEP_impact: MODERATE
        HGVSc: F57H12.3.1:c.105_416del
        HGVSp: CE17124:p.Cys36_Leu139del
        cDNA_position: 118-429
        CDS_position: 105-416
        Protein_position: 35-139
        Exon_number: 3/5
        Codon_change: ccATGCGGACTTCCACCATTCCTTGAGGATCTTCCTTCTGATGTTCAAACCAAGATAACTGAAATCTGGAAAGATTACAAAGAAGGAGACAAGTGTTATGAAGAACAAGGATTAACTCGTGAAATCATGGAATCTCTTCCAAAGGATGTTCGTAAGAGCATTCACAAGAGACCACCACTTCCATTCCTTCGTGGACTTCCAAAGGACATCCTTGCCAAGTTTGATGCTATTTTCAAGGATAAGTCAATCCCATTCAGTGAGAAGCCAGAGAAGATTGATGCTCTCGCTCAAGAAGTTCTTACTGGAGATAACTTg/ccg
        Amino_acid_change: PCGLPPFLEDLPSDVQTKITEIWKDYKEGDKCYEEQGLTREIMESLPKDVRKSIHKRPPLPFLRGLPKDILAKFDAIFKDKSIPFSEKPEKIDALAQEVLTGDNL/P
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele