WormBase Tree Display for Variation: WBVar00093831

WBVar00093831 Name: Public_name: ok2729
    HGVSg: CHROMOSOME_II:g.3305895_3306379del
  Sequence_details: SMap: S_parent: Sequence: F39E9
    Flanking_sequences: tacagatttaattgaaaaccccgcatgacc tcatgtggcctctctgcttttcccgtaccg
    Mapping_target: F39E9
    Type_of_mutation: Deletion
    PCR_product: ok2729_external
      ok2729_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032750
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00195027
      WBGene00195028
      WBGene00249812
      WBGene00018199
      WBGene00003354
    Transcript: F39E9.13
      F39E9.20 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-13
        Exon_number: 1/1
      F39E9.25 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      F39E9.21 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
    Pseudogene: F39E9.7 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: 521-?
        Exon_number: 3/3
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele