WormBase Tree Display for Variation: WBVar00093583

WBVar00093583 Evidence: Paper_evidence: WBPaper00040857
  Name: Public_name: ok2435
    HGVSg: CHROMOSOME_III:g.5017932_5019475del
  Sequence_details: SMap: S_parent: Sequence: R144
    Flanking_sequences: aaataagacggtaaagaattttatcagaat tcagttccaagctcaaaaccgactccacct
    Mapping_target: R144
    Type_of_mutation: Deletion
    PCR_product: ok2435_external
      ok2435_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037056
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00020094
    Transcript: R144.4a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-495
        CDS_position: ?-492
        Protein_position: ?-164
        Intron_number: 2-4/9
        Exon_number: 1-5/10
      R144.4b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-501
        CDS_position: ?-492
        Protein_position: ?-164
        Intron_number: 2-4/9
        Exon_number: 1-5/10
  Isolation: Mutagen: EMS
  Description: Phenotype_not_observed: WBPhenotype:0000436 Paper_evidence: WBPaper00040857
        Curator_confirmed: WBPerson712
        Remark: Mutants showed normal localization of SNB-1::VENUS in the RIA neuron. Paper_evidence: WBPaper00040857
            Curator_confirmed: WBPerson712
  Reference: WBPaper00040857
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele