WormBase Tree Display for Variation: WBVar00093291

WBVar00093291 Name: Public_name: ok2108
    HGVSg: CHROMOSOME_X:g.11727141_11728444del
  Sequence_details: SMap: S_parent: Sequence: D1053
    Flanking_sequences: ccagaatgttgctttagaagaatttcaaga tcatcagagtcgattgttccacgtccccgt
    Mapping_target: D1053
    Type_of_mutation: Deletion
    PCR_product: ok2108_external
      ok2108_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032388
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00008367
      WBGene00001790
    Transcript: D1053.2.1 VEP_consequence: coding_sequence_variant,5_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-294
        CDS_position: ?-294
        Protein_position: ?-98
        Exon_number: 1/4
      D1053.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-562
        CDS_position: ?-422
        Protein_position: ?-141
        Intron_number: 2-5/7
        Exon_number: 1-6/8
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele