WormBase Tree Display for Variation: WBVar00092885

WBVar00092885 Name: Public_name: ok1677
    Other_name: B0212.5.1:c.2068-170_2614-28del
    HGVSg: CHROMOSOME_IV:g.3551379_3552856del
  Sequence_details: SMap: S_parent: Sequence: B0212
    Flanking_sequences: gctctggaatcaaaaatatggatttttgtt cctagctttagcagctcatatctgtgctca
    Mapping_target: B0212
    Type_of_mutation: Deletion
    PCR_product: OK1677_external
      OK1677_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036458
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00200460
      WBGene00022894
      WBGene00003889
    Transcript: B0212.5.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: B0212.5.1:c.2068-170_2614-28del
        Intron_number: 11-13/14
        Exon_number: 12-13/15
      B0212.7 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      B0212.t1 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Isolation: Mutagen: EMS
  Description: Phenotype: WBPhenotype:0001418 Paper_evidence: WBPaper00044578
        Curator_confirmed: WBPerson12259
        Remark: Figure 5B Paper_evidence: WBPaper00044578
            Curator_confirmed: WBPerson12259
  Reference: WBPaper00044578
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele