WormBase Tree Display for Variation: WBVar00092335
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WBVar00092335 | Name | Public_name | ok1066 | ||
---|---|---|---|---|---|
Other_name | F57B9.4a.1:c.515+160_601+291del | ||||
F57B9.4e.1:c.515+160_735+32del | |||||
HGVSg | CHROMOSOME_III:g.6937058_6937765del | ||||
Sequence_details | SMap | S_parent | Sequence | F57B9 | |
Flanking_sequences | caagaaagtttttgttaatgcgaaaagatt | gaagagttttgagaatattttccattttca | |||
Mapping_target | F57B9 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok1066_external | ||||
ok1066_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00028690 | ||||
WBStrain00036037 | |||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00000762 | |||
WBGene00305460 | |||||
Transcript | F57B9.13 | ||||
F57B9.4a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | F57B9.4a.1:c.515+160_601+291del | ||||
Intron_number | 5-6/9 | ||||
Exon_number | 6/10 | ||||
F57B9.4e.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | F57B9.4e.1:c.515+160_735+32del | ||||
Intron_number | 5-7/9 | ||||
Exon_number | 6-7/10 | ||||
Isolation | Mutagen | UV/TMP | |||
Genetics | Mapping_data | In_multi_point | 4970 | ||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |