WormBase Tree Display for Variation: WBVar00092092

WBVar00092092 Name: Public_name: ok813
    Other_name: C41C4.7b.1:c.113_*164del
      C41C4.7a.1:c.113_*25del
    HGVSg: CHROMOSOME_II:g.8134854_8136795del
  Sequence_details: SMap: S_parent: Sequence: C41C4
    Flanking_sequences: ttgaatatgtacaacaaaaggcaccgagga cttctcctccaattacaatttccaattctt
    Mapping_target: C41C4
    Type_of_mutation: Deletion
    PCR_product: ok813_external
      ok813_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031645
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00008052
    Transcript: C41C4.7b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C41C4.7b.1:c.113_*164del
        cDNA_position: 124-1300
        CDS_position: 113-?
        Protein_position: 38-?
        Intron_number: 2-8/8
        Exon_number: 2-9/9
      C41C4.7a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C41C4.7a.1:c.113_*25del
        cDNA_position: 122-1249
        CDS_position: 113-?
        Protein_position: 38-?
        Intron_number: 2-6/7
        Exon_number: 2-8/8
  Isolation: Mutagen: UV/TMP
  Disease_info: Models_disease: DOID:1064
    Models_disease_in_annotation: WBDOannot00000118
  Reference: WBPaper00066025
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele