WormBase Tree Display for Variation: WBVar00092075
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WBVar00092075 | Evidence | Paper_evidence | WBPaper00030973 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | ok795 | |||||||
HGVSg | CHROMOSOME_X:g.14182876_14185025del | ||||||||
Sequence_details (6) | |||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00022465 | ||||||||
WBStrain00035889 | |||||||||
Laboratory | RB | ||||||||
Person | WBPerson46 | ||||||||
KO_consortium_allele | |||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00000457 | |||||||
Transcript | C37E2.4.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||||||
VEP_impact | HIGH | ||||||||
Intron_number | 3-7/8 | ||||||||
Exon_number | 4-9/9 | ||||||||
Interactor | WBInteraction000520809 | ||||||||
WBInteraction000525161 | |||||||||
WBInteraction000534899 | |||||||||
WBInteraction000534900 | |||||||||
Isolation | Mutagen | UV/TMP | |||||||
Description | Phenotype | WBPhenotype:0000050 | Paper_evidence | WBPaper00030973 | |||||
WBPaper00046510 | |||||||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPerson3733 | |||||||||
Recessive | Paper_evidence | WBPaper00030973 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | Paper_evidence | WBPaper00030973 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0000054 | Paper_evidence | WBPaper00046510 | |||||||
Curator_confirmed | WBPerson3733 | ||||||||
WBPhenotype:0001660 | Paper_evidence | WBPaper00044621 | |||||||
Curator_confirmed | WBPerson6538 | ||||||||
Remark | Fig 3B, C. Loss of ASE asymmetry | Paper_evidence | WBPaper00044621 | ||||||
Curator_confirmed | WBPerson6538 | ||||||||
Penetrance | High | Paper_evidence | WBPaper00044621 | ||||||
Curator_confirmed | WBPerson6538 | ||||||||
Variation_effect | Loss_of_function_undetermined_extent (2) | ||||||||
EQ_annotations | Anatomy_term | WBbt:0005663 | PATO:0000460 | Paper_evidence | WBPaper00044621 | ||||
Curator_confirmed | WBPerson6538 | ||||||||
Reference | WBPaper00030973 | ||||||||
WBPaper00044621 | |||||||||
WBPaper00046510 | |||||||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||||||
Method | KO_consortium_allele |