WormBase Tree Display for Variation: WBVar00091741

WBVar00091741 Evidence: Paper_evidence: WBPaper00033444
  Name: Public_name: ok450
    HGVSg: CHROMOSOME_X:g.6818899_6820954delinsGGGTTTCAAGGTCC
  Sequence_details: SMap: S_parent: Sequence: F41B4
    Flanking_sequences: ctgctcaattttcagatcttatcttcaagg tttttttttttcattttttttgtatgatac
    Mapping_target: F41B4
    Type_of_mutation: Insertion: GGGTTTCAAGGTCC
      Deletion
    PCR_product: ok450_external
      ok450_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00035626
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00001572
      WBGene00000991
    Transcript: M03A8.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 7-10/11
        Exon_number: 8-12/12
      M03A8.1.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: 366-?
        CDS_position: 359-?
        Protein_position: 120-?
        Intron_number: 4-6/7
        Exon_number: 4-8/8
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 4258
        4343
  Description: Phenotype: WBPhenotype:0000519 Paper_evidence: WBPaper00033444
        Curator_confirmed: WBPerson2021
        Remark: Mutant strains tested showed altered fitness compared to wild type when exposed to different bacterial environments such as E. coli, M. luteus, and Pseudomonas sp.and B. megaterium Paper_evidence: WBPaper00033444
            Curator_confirmed: WBPerson2021
        Variation_effect: Null: Paper_evidence: WBPaper00033444
            Curator_confirmed: WBPerson2021
  Reference: WBPaper00033444
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele