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WormBase Tree Display for Variation: WBVar00091724

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Name Class

WBVar00091724EvidencePaper_evidenceWBPaper00028382
NamePublic_nameok430
Other_nameCE25042:p.Tyr454_Ter796delinsTer
K04G7.3b.1:c.828_1853delinsAGGGGGATCTAAAGTCTCTAGGGAGTCTAGGGAGGTCTATTTTGCCAAACATTTCCAGTCACTGTTTGAATTCTTTCTAAATTATTCCTCATTCAATAAAACAAAATTTATTGCATTTTATTTTTTCGAGATCTAAATTGT
K04G7.3a.1:c.1362_2387delinsAGGGGGATCTAAAGTCTCTAGGGAGTCTAGGGAGGTCTATTTTGCCAAACATTTCCAGTCACTGTTTGAATTCTTTCTAAATTATTCCTCATTCAATAAAACAAAATTTATTGCATTTTATTTTTTCGAGATCTAAATTGT
CE39588:p.Tyr276_Ter618delinsTer
HGVSgCHROMOSOME_III:g.7148323_7149416delinsACAATTTAGATCTCGAAAAAATAAAATGCAATAAATTTTGTTTTATTGAATGAGGAATAATTTAGAAAGAATTCAAACAGTGACTGGAAATGTTTGGCAAAATAGACCTCCCTAGACTCCCTAGAGACTTTAGATCCCCCT
Sequence_detailsSMapS_parentSequenceK04G7
Flanking_sequencesATATATGCGAGCTTCTCTGTAAATGCATTTTATAGTCGAGTGGCATCTTCGATCTTTCCT
Mapping_targetK04G7
Type_of_mutationInsertionacaatttagatctcgaaaaaataaaatgcaataaattttgttttattgaatgaggaataatttagaaagaattcaaacagtgactggaaatgtttggcaaaatagacctccctagactccctagagactttagatccccct
Deletion
PCR_productOK430_external
OK430_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031394
WBStrain00055877
LaboratoryRB
JH
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00003858
TranscriptK04G7.3a.1 (11)
K04G7.3b.1 (11)
InteractorWBInteraction000504353
WBInteraction000518026
WBInteraction000518027
WBInteraction000518031
WBInteraction000518543
IsolationMutagenUV/TMP
GeneticsMapping_dataIn_multi_point4557
Description (2)
Disease_infoModels_diseaseDOID:9351
DOID:9352
Models_disease_in_annotationWBDOannot00000733
WBDOannot00000734
WBDOannot00000915
WBDOannot00000916
ReferenceWBPaper00038233
WBPaper00035502
WBPaper00036090
WBPaper00045080
WBPaper00065742
WBPaper00064694
RemarkDeletion allele generates a truncated protein of 465 aa that lacks catalytic activityPaper_evidenceWBPaper00028382
Sequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele