WormBase Tree Display for Variation: WBVar00091724
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WBVar00091724 | Evidence | Paper_evidence | WBPaper00028382 | ||
---|---|---|---|---|---|
Name | Public_name | ok430 | |||
Other_name | CE25042:p.Tyr454_Ter796delinsTer | ||||
K04G7.3b.1:c.828_1853delinsAGGGGGATCTAAAGTCTCTAGGGAGTCTAGGGAGGTCTATTTTGCCAAACATTTCCAGTCACTGTTTGAATTCTTTCTAAATTATTCCTCATTCAATAAAACAAAATTTATTGCATTTTATTTTTTCGAGATCTAAATTGT | |||||
K04G7.3a.1:c.1362_2387delinsAGGGGGATCTAAAGTCTCTAGGGAGTCTAGGGAGGTCTATTTTGCCAAACATTTCCAGTCACTGTTTGAATTCTTTCTAAATTATTCCTCATTCAATAAAACAAAATTTATTGCATTTTATTTTTTCGAGATCTAAATTGT | |||||
CE39588:p.Tyr276_Ter618delinsTer | |||||
HGVSg | CHROMOSOME_III:g.7148323_7149416delinsACAATTTAGATCTCGAAAAAATAAAATGCAATAAATTTTGTTTTATTGAATGAGGAATAATTTAGAAAGAATTCAAACAGTGACTGGAAATGTTTGGCAAAATAGACCTCCCTAGACTCCCTAGAGACTTTAGATCCCCCT | ||||
Sequence_details | SMap | S_parent | Sequence | K04G7 | |
Flanking_sequences | ATATATGCGAGCTTCTCTGTAAATGCATTT | TATAGTCGAGTGGCATCTTCGATCTTTCCT | |||
Mapping_target | K04G7 | ||||
Type_of_mutation | Insertion | acaatttagatctcgaaaaaataaaatgcaataaattttgttttattgaatgaggaataatttagaaagaattcaaacagtgactggaaatgtttggcaaaatagacctccctagactccctagagactttagatccccct | |||
Deletion | |||||
PCR_product | OK430_external | ||||
OK430_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00031394 | ||||
WBStrain00055877 | |||||
Laboratory | RB | ||||
JH | |||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00003858 | |||
Transcript | K04G7.3a.1 (11) | ||||
K04G7.3b.1 (11) | |||||
Interactor | WBInteraction000504353 | ||||
WBInteraction000518026 | |||||
WBInteraction000518027 | |||||
WBInteraction000518031 | |||||
WBInteraction000518543 | |||||
Isolation | Mutagen | UV/TMP | |||
Genetics | Mapping_data | In_multi_point | 4557 | ||
Description (2) | |||||
Disease_info | Models_disease | DOID:9351 | |||
DOID:9352 | |||||
Models_disease_in_annotation | WBDOannot00000733 | ||||
WBDOannot00000734 | |||||
WBDOannot00000915 | |||||
WBDOannot00000916 | |||||
Reference | WBPaper00038233 | ||||
WBPaper00035502 | |||||
WBPaper00036090 | |||||
WBPaper00045080 | |||||
WBPaper00065742 | |||||
WBPaper00064694 | |||||
Remark | Deletion allele generates a truncated protein of 465 aa that lacks catalytic activity | Paper_evidence | WBPaper00028382 | ||
Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | |||
Method | KO_consortium_allele |