WormBase Tree Display for Variation: WBVar00091551

WBVar00091551 Name: Public_name: ok248
    Other_name: R07E4.6a.1:c.175-27_*306del
      R07E4.6b.1:c.79-27_*306del
    HGVSg: CHROMOSOME_X:g.5971389_5973231del
  Sequence_details: SMap: S_parent: Sequence: R07E4
    Flanking_sequences: taaaacaatgaatgttgttttggctatgag gtttgaaaataaaagatgtgcaaaataaca
    Mapping_target: R07E4
    Type_of_mutation: Deletion
    PCR_product: ok248_external
      ok248_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036114
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00002190
    Transcript: R07E4.6c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-7/7
        Exon_number: 3-8/8
      R07E4.6b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R07E4.6b.1:c.79-27_*306del
        cDNA_position: ?-1333
        Intron_number: 2-7/8
        Exon_number: 3-9/9
      R07E4.6a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R07E4.6a.1:c.175-27_*306del
        cDNA_position: ?-1421
        Intron_number: 3-8/9
        Exon_number: 4-10/10
  Isolation: Mutagen: UV/TMP
  Genetics: Mapping_data: In_multi_point: 4456
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele