WormBase Tree Display for Variation: WBVar00091422
expand all nodes | collapse all nodes | view schema
| WBVar00091422 | Evidence | Paper_evidence | WBPaper00017010 | |||||
|---|---|---|---|---|---|---|---|---|
| Name | Public_name | nu329 | ||||||
| Other_name | F17C8.1.1:c.1099+1G>A | |||||||
| HGVSg | CHROMOSOME_III:g.4726669G>A | |||||||
| Sequence_details | SMap | S_parent | Sequence | F17C8 | ||||
| Flanking_sequences | tgagaggattagagaagatttcaactttgg | taatattatattttcaaaatttcaacgatt | ||||||
| Mapping_target | F17C8 | |||||||
| Type_of_mutation | Substitution | g | a | |||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Allele | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00023627 | |||||||
| Laboratory | KP | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00000068 | ||||||
| Transcript | F17C8.1.1 | VEP_consequence | splice_donor_variant | |||||
| VEP_impact | HIGH | |||||||
| HGVSc | F17C8.1.1:c.1099+1G>A | |||||||
| Intron_number | 7/14 | |||||||
| Interactor | WBInteraction000534909 | |||||||
| Isolation | Mutagen | EMS | ||||||
| Genetics | Interpolated_map_position | III | -2.64859 | |||||
| Description | Phenotype | WBPhenotype:0000273 | Paper_evidence | WBPaper00051284 | ||||
| Curator_confirmed | WBPerson37651 | |||||||
| Remark | Figure 2 | Paper_evidence | WBPaper00051284 | |||||
| Curator_confirmed | WBPerson37651 | |||||||
| Phenotype_assay | Control_strain | WBStrain00000001 | Paper_evidence | WBPaper00051284 | ||||
| Curator_confirmed | WBPerson37651 | |||||||
| WBPhenotype:0001911 | Paper_evidence | WBPaper00049131 | ||||||
| Curator_confirmed | WBPerson712 | |||||||
| Remark | a loss-of-function mutation of acy-1, which encodes adenylyl cyclase, was defective in axon regeneration (Fig. 5c and Supplementary Table 2) | Paper_evidence | WBPaper00049131 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| Variation_effect | Loss_of_function_undetermined_extent | Paper_evidence | WBPaper00049131 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| WBPhenotype:0002241 | Paper_evidence | WBPaper00051284 | ||||||
| Curator_confirmed | WBPerson37651 | |||||||
| Remark | Supplementary Figure 3 | Paper_evidence | WBPaper00051284 | |||||
| Curator_confirmed | WBPerson37651 | |||||||
| Phenotype_assay | Control_strain | WBStrain00000001 | Paper_evidence | WBPaper00051284 | ||||
| Curator_confirmed | WBPerson37651 | |||||||
| Phenotype_not_observed | WBPhenotype:0000583 | Person_evidence | WBPerson23417 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| WBPhenotype:0001700 | Paper_evidence | WBPaper00051284 | ||||||
| Curator_confirmed | WBPerson37651 | |||||||
| Phenotype_assay | Control_strain | WBStrain00000001 | Paper_evidence | WBPaper00051284 | ||||
| Curator_confirmed | WBPerson37651 | |||||||
| Reference | WBPaper00017010 | |||||||
| WBPaper00049131 | ||||||||
| WBPaper00051284 | ||||||||
| Method | Substitution_allele |
