WormBase Tree Display for Variation: WBVar00090199
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| WBVar00090199 | Evidence | Paper_evidence | WBPaper00002930 | |||||
|---|---|---|---|---|---|---|---|---|
| Name | Public_name | n1516 | ||||||
| Other_name | B0212.5.1:c.514+1G>A | |||||||
| HGVSg | CHROMOSOME_IV:g.3556094C>T | |||||||
| Sequence_details | SMap | S_parent | Sequence | B0212 | ||||
| Flanking_sequences | atgacatttatttgggggatgagcaatttg | taagcggcttgttttgaagcggcctgaaac | ||||||
| Mapping_target | B0212 | |||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00024918 | |||
| SeqStatus | Sequenced | |||||||
| Variation_type | Allele | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Laboratory | MT | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00003889 | ||||||
| Transcript | B0212.5.1 | VEP_consequence | splice_donor_variant | |||||
| VEP_impact | HIGH | |||||||
| HGVSc | B0212.5.1:c.514+1G>A | |||||||
| Intron_number | 4/14 | |||||||
| Genetics | Interpolated_map_position | IV | -3.15545 | |||||
| Description | Phenotype | WBPhenotype:0000249 | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Phenotype_assay | Treatment | 1cm high ring of 4M fructose | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| WBPhenotype:0000303 | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Phenotype_assay | Treatment | 1:1000 dilution of diacetyl | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| WBPhenotype:0000480 | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Affected_by | Molecule | WBMol:00005360 | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| Phenotype_assay | Treatment | 10mg/ml pyrazine | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| WBPhenotype:0001221 | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Remark | Mutants show reduced avoidance to nose touch stimuli (<20 percent) | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Phenotype_not_observed | WBPhenotype:0000302 | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Phenotype_assay | Treatment | 1:200 dilution of benzaldehyde | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| WBPhenotype:0000304 | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Phenotype_assay | Treatment | 1:100 dilution of isoamyl alcohol | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| WBPhenotype:0000398 | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Remark | Mutants respond to stroking to the body with a hair | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| WBPhenotype:0001085 | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Phenotype_assay | Treatment | 1:1000 dilution of butanone | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| WBPhenotype:0001086 | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Recessive | Paper_evidence | WBPaper00002930 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Null | Paper_evidence | WBPaper00002930 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Phenotype_assay | Treatment | 1:1000 dilution of trimethylthiazole | Paper_evidence | WBPaper00002930 | ||||
| Curator_confirmed | WBPerson2021 | |||||||
| Reference | WBPaper00002930 | |||||||
| Method | Substitution_allele |
