WormBase Tree Display for Variation: WBVar00089591
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WBVar00089591 | Evidence | Paper_evidence | WBPaper00004497 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | n538 | |||||
Other_name | CE43285:p.Pro391Ser | ||||||
T25C12.1b.1:c.1165C>T | |||||||
T25C12.1a.1:c.1171C>T | |||||||
CE03734:p.Pro389Ser | |||||||
HGVSg | CHROMOSOME_X:g.11483676C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | T25C12 | |||
Flanking_sequences | ggtctcaaccactcgaactatgcaaatctt | caatcaaaggaatttgctatattcaacgta | |||||
Mapping_target | T25C12 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00004497 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | MT | ||||||
Status | Live | ||||||
Linked_to | WBVar00089588 | ||||||
WBVar00089592 | |||||||
Affects | Gene | WBGene00003003 | |||||
Transcript | T25C12.1b.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | T25C12.1b.1:c.1165C>T | ||||||
HGVSp | CE03734:p.Pro389Ser | ||||||
cDNA_position | 1296 | ||||||
CDS_position | 1165 | ||||||
Protein_position | 389 | ||||||
Exon_number | 8/12 | ||||||
Codon_change | Cca/Tca | ||||||
Amino_acid_change | P/S | ||||||
T25C12.1a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
HGVSc | T25C12.1a.1:c.1171C>T | ||||||
HGVSp | CE43285:p.Pro391Ser | ||||||
cDNA_position | 1293 | ||||||
CDS_position | 1171 | ||||||
Protein_position | 391 | ||||||
Exon_number | 10/14 | ||||||
Codon_change | Cca/Tca | ||||||
Amino_acid_change | P/S | ||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00004497 | |||
Genetics | Interpolated_map_position | X | 3.86625 | ||||
Reference | WBPaper00004497 | ||||||
Method | Substitution_allele |