WormBase Tree Display for Variation: WBVar00089585
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WBVar00089585 | Evidence | Paper_evidence | WBPaper00004497 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | n534 | |||||
Other_name | T25C12.1a.1:c.131G>A | ||||||
CE43285:p.Trp44Ter | |||||||
HGVSg | CHROMOSOME_X:g.11469543G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | T25C12 | |||
Flanking_sequences | caacggtagacgaaatgaattgcgaggaat | gggaaatggaacggaaagtacgcagtcagt | |||||
Mapping_target | T25C12 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00004497 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00026800 | ||||||
Laboratory | MT | ||||||
Status | Live | ||||||
Linked_to | WBVar00089447 | ||||||
Affects | Gene | WBGene00003003 | |||||
Transcript | T25C12.1a.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | T25C12.1a.1:c.131G>A | ||||||
HGVSp | CE43285:p.Trp44Ter | ||||||
cDNA_position | 253 | ||||||
CDS_position | 131 | ||||||
Protein_position | 44 | ||||||
Exon_number | 4/14 | ||||||
Codon_change | tGg/tAg | ||||||
Amino_acid_change | W/* | ||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00004497 | |||
Genetics | Interpolated_map_position | X | 3.778 | ||||
Reference | WBPaper00004497 | ||||||
Method | Substitution_allele |