WormBase Tree Display for Variation: WBVar00089143
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WBVar00089143 | Evidence | Paper_evidence | WBPaper00002087 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | mn392 | |||||
Other_name | CE06757:p.Ser140Ter | ||||||
C02H7.1.1:c.419C>G | |||||||
HGVSg | CHROMOSOME_X:g.764797C>G | ||||||
Sequence_details | SMap | S_parent | Sequence | C02H7 | |||
Flanking_sequences | aggacaaaaagggagatgaagaagagaagt | aactactaaaaaacgtagcagtaagaaggt | |||||
Mapping_target | C02H7 | ||||||
Type_of_mutation | Substitution | c | g | Paper_evidence | WBPaper00031624 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00034382 | ||||||
Laboratory | SP | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00001127 | |||||
Transcript | C02H7.1.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | C02H7.1.1:c.419C>G | ||||||
HGVSp | CE06757:p.Ser140Ter | ||||||
cDNA_position | 436 | ||||||
CDS_position | 419 | ||||||
Protein_position | 140 | ||||||
Exon_number | 4/9 | ||||||
Codon_change | tCa/tGa | ||||||
Amino_acid_change | S/* | ||||||
Interactor | WBInteraction000503546 | ||||||
WBInteraction000503547 | |||||||
WBInteraction000503548 | |||||||
WBInteraction000503549 | |||||||
Genetics | Interpolated_map_position | X | -19.5015 | ||||
Mapping_data | In_multi_point | 3080 | |||||
3081 | |||||||
3082 | |||||||
3083 | |||||||
Description | Phenotype (7) | ||||||
Phenotype_not_observed | WBPhenotype:0000398 | Paper_evidence | WBPaper00002087 | ||||
Curator_confirmed | WBPerson48 | ||||||
WBPhenotype:0000646 | Paper_evidence | WBPaper00002087 | |||||
Curator_confirmed | WBPerson48 | ||||||
Remark | Normal mobility when prodded. | Paper_evidence | WBPaper00002087 | ||||
Curator_confirmed | WBPerson48 | ||||||
Reference | WBPaper00002087 | ||||||
WBPaper00055368 | |||||||
Method | Substitution_allele |