WormBase Tree Display for Variation: WBVar00088819

WBVar00088819 Evidence: Paper_evidence: WBPaper00004891
  Name: Public_name: md293
    Other_name: T10A3.1b.1:c.995-12_1013del
      T10A3.1e.1:c.995-12_1013del
      T10A3.1c.1:c.995-12_1013del
      T10A3.1f.1:c.995-12_1013del
      T10A3.1d.1:c.995-12_1013del
      T10A3.1a.1:c.995-12_1013del
    HGVSg: CHROMOSOME_X:g.7278025_7278055del
  Sequence_details: SMap: S_parent: Sequence: K03A1
    Flanking_sequences: ttgcgaacgagacgcaaattgatatagtct ggataacaacagaatgagagagaatactaa
    Mapping_target: K03A1
    Type_of_mutation: Deletion: ggataatttcagaaatgaatgaacaacggac Paper_evidence: WBPaper00004891
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: RM
    Status: Live
  Affects: Gene: WBGene00006750
    Transcript: T10A3.1c.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T10A3.1c.1:c.995-12_1013del
        cDNA_position: ?-1013
        CDS_position: ?-1013
        Protein_position: ?-338
        Intron_number: 7/28
        Exon_number: 8/29
      T10A3.1d.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T10A3.1d.1:c.995-12_1013del
        cDNA_position: ?-1013
        CDS_position: ?-1013
        Protein_position: ?-338
        Intron_number: 7/27
        Exon_number: 8/28
      T10A3.1e.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T10A3.1e.1:c.995-12_1013del
        cDNA_position: ?-1013
        CDS_position: ?-1013
        Protein_position: ?-338
        Intron_number: 7/27
        Exon_number: 8/28
      T10A3.1b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T10A3.1b.1:c.995-12_1013del
        cDNA_position: ?-1013
        CDS_position: ?-1013
        Protein_position: ?-338
        Intron_number: 7/27
        Exon_number: 8/28
      T10A3.1a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T10A3.1a.1:c.995-12_1013del
        cDNA_position: ?-1034
        CDS_position: ?-1013
        Protein_position: ?-338
        Intron_number: 8/27
        Exon_number: 9/28
      T10A3.1f.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T10A3.1f.1:c.995-12_1013del
        cDNA_position: ?-1013
        CDS_position: ?-1013
        Protein_position: ?-338
        Intron_number: 7/26
        Exon_number: 8/27
  Genetics: Interpolated_map_position: X -1.78156
  Reference: WBPaper00004891
  Method: Deletion_allele