WormBase Tree Display for Variation: WBVar00084336

WBVar00084336 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar00084336
    Other_name: pas28876
      haw108696
      cewivar00116296
      F55F3.3b.1:c.238+300A>G
      F55F3.3a.1:c.280+300A>G
    HGVSg: CHROMOSOME_X:g.13767483T>C
  Sequence_details: SMap: S_parent: Sequence: F55F3
    Flanking_sequences: cgctgatagacgtttcattgacaca acttcggtcacctacgtcaactcga
    Mapping_target: F55F3
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (108)
    Laboratory: RW
      QX
    Person: WBPerson1562
      WBPerson6900
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
      WGS_Andersen
    History: Acquires_merge: WBVar00217100
        WBVar01472188
    Status: Live
  Affects: Gene: WBGene00010117
    Transcript: F55F3.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F55F3.3a.1:c.280+300A>G
        Intron_number: 4/8
      F55F3.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F55F3.3b.1:c.238+300A>G
        Intron_number: 2/6
  Reference: WBPaper00040707
  Remark: [20081124 db] this Variation was previously named hw108696
  Method: WGS_Hawaiian_Waterston