WormBase Tree Display for Variation: WBVar00083583
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WBVar00083583 | Name | Public_name | WBVar00083583 | ||
---|---|---|---|---|---|
Other_name | haw107943 | ||||
cewivar00276283 | |||||
H20J18.1a.3:c.-98-89T>A | |||||
H20J18.1f.1:c.-98-89T>A | |||||
H20J18.1c.1:c.305-89T>A | |||||
HGVSg | CHROMOSOME_X:g.12514137A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C16D6 | |
Flanking_sequences | taaaatgtgtagctgaacaggtgaa | tgctaaaaccaatttggctaacggt | |||
Mapping_target | C16D6 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004739 | |||
Transcript | H20J18.1a.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H20J18.1a.3:c.-98-89T>A | ||||
Intron_number | 1/14 | ||||
H20J18.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H20J18.1f.1:c.-98-89T>A | ||||
Intron_number | 1/14 | ||||
H20J18.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H20J18.1c.1:c.305-89T>A | ||||
Intron_number | 1/12 | ||||
Remark | [20081124 db] this Variation was previously named hw107943 | ||||
Method | WGS_Hawaiian_Waterston |