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WormBase Tree Display for Variation: WBVar00083583

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Name Class

WBVar00083583NamePublic_nameWBVar00083583
Other_namehaw107943
cewivar00276283
H20J18.1a.3:c.-98-89T>A
H20J18.1f.1:c.-98-89T>A
H20J18.1c.1:c.305-89T>A
HGVSgCHROMOSOME_X:g.12514137A>T
Sequence_detailsSMapS_parentSequenceC16D6
Flanking_sequencestaaaatgtgtagctgaacaggtgaatgctaaaaccaatttggctaacggt
Mapping_targetC16D6
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004739
TranscriptH20J18.1a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH20J18.1a.3:c.-98-89T>A
Intron_number1/14
H20J18.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH20J18.1f.1:c.-98-89T>A
Intron_number1/14
H20J18.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH20J18.1c.1:c.305-89T>A
Intron_number1/12
Remark[20081124 db] this Variation was previously named hw107943
MethodWGS_Hawaiian_Waterston