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WormBase Tree Display for Variation: WBVar00078321

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Name Class

WBVar00078321NamePublic_nameWBVar00078321
Other_namehaw102681
cewivar00273313
F39C12.2a.1:c.589-17G>A
F39C12.2e.1:c.589-17G>A
F39C12.2d.1:c.589-17G>A
F39C12.2b.1:c.589-17G>A
F39C12.2c.1:c.589-17G>A
HGVSgCHROMOSOME_X:g.4858391C>T
Sequence_detailsSMapS_parentSequenceF39C12
Flanking_sequencesaaacgcaggcttaacttgatgagtgaaaaataagtcgtttttgattttaa
Mapping_targetF39C12
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000072
TranscriptF39C12.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2b.1:c.589-17G>A
Intron_number6/19
F39C12.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2a.1:c.589-17G>A
Intron_number5/16
F39C12.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2c.1:c.589-17G>A
Intron_number6/18
F39C12.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2e.1:c.589-17G>A
Intron_number5/15
F39C12.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2d.1:c.589-17G>A
Intron_number5/16
Remark[20081124 db] this Variation was previously named hw102681
MethodWGS_Hawaiian_Waterston