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WormBase Tree Display for Variation: WBVar00078320

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Name Class

WBVar00078320NamePublic_nameWBVar00078320
Other_namehaw102680
cewivar00125624
F39C12.2c.1:c.757-112T>A
F39C12.2e.1:c.757-112T>A
F39C12.2b.1:c.757-112T>A
F39C12.2a.1:c.757-112T>A
F39C12.2d.1:c.757-112T>A
HGVSgCHROMOSOME_X:g.4857972A>T
Sequence_detailsSMapS_parentSequenceF39C12
Flanking_sequencescgatgaacttttctatatctactttagtactaaaactaccgatttacatg
Mapping_targetF39C12
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000072
TranscriptF39C12.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2b.1:c.757-112T>A
Intron_number7/19
F39C12.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2a.1:c.757-112T>A
Intron_number6/16
F39C12.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2c.1:c.757-112T>A
Intron_number7/18
F39C12.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2e.1:c.757-112T>A
Intron_number6/15
F39C12.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF39C12.2d.1:c.757-112T>A
Intron_number6/16
Remark[20081124 db] this Variation was previously named hw102680
MethodWGS_Hawaiian_Waterston