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WormBase Tree Display for Variation: WBVar00065194

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Name Class

WBVar00065194EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00065194
Other_namepas24636
haw44704
cewivar00108049
F10E9.6a.3:c.-12-5614C>A
F10E9.6c.1:c.325-5614C>A
F10E9.6a.2:c.-12-5614C>A
HGVSgCHROMOSOME_III:g.8288423C>A
Sequence_detailsSMapS_parentSequenceF10E9
Flanking_sequencestttcggtttacacatctaaagtatttgtctggaaaaatgtttatcaagttttggaattaattttcgagcattttctgatacaattgaaaatctgcagctcttttacgggctcgggagaatttttgttttccgcaaaagaatgagcgtttttctgatgtacagttctaaattagtttttttaaaactatcagctttcaaatatctctttctccgattgccaatattaataaaaatgtattttccatagcctcatgtgaaaattgtcgcaattttctagtttctgagcttcacaaattgtcagctcgcaagttttcacttgatattttgctaaaatattcgcggttttttgttgcaaattcacatatttcaaaggtgtgtcttgaccactcgaatacctcggaaatccgcgaaaactctgcggtaagcgcaaagagctcaagaccggaagcatctctcccgcgcgctcttgcgagaacaagagagataaaatgataaaagaatttgcctgaatctctcaatatctgtgccaactctttccttccaattgattgatcatgttctcactctcatcattcacacacattctctaattctcttcac
Mapping_targetF10E9
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (30)
LaboratoryAX
RW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00067913
WBVar01266162
WBVar01331533
StatusLive
AffectsGeneWBGene00003243
TranscriptF10E9.6a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF10E9.6a.3:c.-12-5614C>A
Intron_number2/12
F10E9.6c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF10E9.6c.1:c.325-5614C>A
Intron_number2/10
F10E9.6a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF10E9.6a.2:c.-12-5614C>A
Intron_number1/11
ReferenceWBPaper00037807
MethodWGS_Pasadena_Quinlan