WormBase Tree Display for Variation: WBVar00065169
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| WBVar00065169 | Name | Public_name | WBVar00065169 | ||
|---|---|---|---|---|---|
| Other_name | pas24631 | ||||
| haw44702 | |||||
| haw144391 | |||||
| cewivar00108044 | |||||
| F10E9.6c.1:c.74+799A>G | |||||
| F10E9.6a.3:c.-263+799A>G | |||||
| HGVSg | CHROMOSOME_III:g.8279980A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F10E9 | |
| Flanking_sequences | agttgaccggaccttcaccctcatcgagcaaaagattgctatctcaacttgcgtttttgtctgtgactcacaatttcctataatctctaagctggcatgttcgtacgtcctttacgcctatctcgtgcattcagataacttgattatatgttctatttgttggtttattggcgatgcttctgaattgattactttttcttgtcgtgtttcgtaacactagtattagcagtagcttcagcctaatttccagttaggccttttttccaatgacctcatttcccgtattctatacacttgatt | gttttctttggttacggtcatttatcattcgcagatgatttagtgacaatccggcaaaagaaatagaacggaaggccatccagatgtgattttctatgatcttttcttgttggctgtacggttttccttgaaacctactggattttcgttcagaattttttgttggttttccaaaaatatgacttatagcttagatcggaatgtaacaaaacttttgaatgtgtgttgaagtgttcagaactttttatttcatgtaatttctccaaagaaaccgcagcctttttaaaaaattatctaaat | |||
| Mapping_target | F10E9 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (29) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00564256 | |||
| WBVar01331530 | |||||
| WBVar00067903 | |||||
| WBVar01266159 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003243 | |||
| Transcript | F10E9.6a.3 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F10E9.6a.3:c.-263+799A>G | ||||
| Intron_number | 1/12 | ||||
| F10E9.6c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F10E9.6c.1:c.74+799A>G | ||||
| Intron_number | 1/10 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
