WormBase Tree Display for Variation: WBVar00064634
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WBVar00064634 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00064634 | |||
Other_name | pas24524 | ||||
haw107187 | |||||
cewivar00061548 | |||||
F31B12.1k.1:c.1958-34A>C | |||||
F31B12.1l.1:c.1787-34A>C | |||||
F31B12.1g.1:c.1787-34A>C | |||||
F31B12.1i.1:c.1958-34A>C | |||||
F31B12.1h.1:c.1787-34A>C | |||||
F31B12.1j.1:c.1787-34A>C | |||||
F31B12.1d.1:c.1958-34A>C | |||||
HGVSg | CHROMOSOME_X:g.10824725T>G | ||||
Sequence_details | SMap | S_parent | Sequence | F31B12 | |
Flanking_sequences | aagttggttctaacaaagctaccaagcttctgagctgatgtcgttcagacaaccgacttcgaaattttctgtaaaattttttgatctcatcaaatttcattttctcatcaaattactttgcgtgtgttaagaatagcaataatctggccaccaatatctgtgtacaatgagcacaacactgcctccatcgatgagccggactacaaacagatcttgaccctacttcccggttttgcattgttatcgcgttgtgcaaggccacaatgactaaaatggaaaacatcttgtttttagtgtaaa | ttttgaatgtttgcaagcaagcaaacaacacacaaaccctggcttggatccatttcgctgaaagaattcattaagtcggacttgtgtcgagttggtgccaccgtaggagaaggtaataacgattggtctctagaaaacagaaggctgttattaaatgttgaatgtgactaggtattacttatagccagctccgtaaatgaaaacatgatcgacagttgagttttggtctgcatttgagttgaaagattcgccagctgaaataaatgtgttttgaaaaaaacttgaagcttcgtctcggtg | |||
Mapping_target | F31B12 | ||||
Type_of_mutation | Substitution | T | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (192) | |||||
Laboratory | QX | ||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson1730 | |||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar00082827 | |||
WBVar01470957 | |||||
Status | Live | ||||
Affects | Gene | WBGene00004036 | |||
Transcript | F31B12.1j.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1j.1:c.1787-34A>C | ||||
Intron_number | 17/63 | ||||
F31B12.1g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1g.1:c.1787-34A>C | ||||
Intron_number | 17/63 | ||||
F31B12.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1d.1:c.1958-34A>C | ||||
Intron_number | 18/64 | ||||
F31B12.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1h.1:c.1787-34A>C | ||||
Intron_number | 17/63 | ||||
F31B12.1l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1l.1:c.1787-34A>C | ||||
Intron_number | 17/63 | ||||
F31B12.1i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1i.1:c.1958-34A>C | ||||
Intron_number | 18/64 | ||||
F31B12.1k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F31B12.1k.1:c.1958-34A>C | ||||
Intron_number | 18/64 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Pasadena_Quinlan |