WormBase Tree Display for Variation: WBVar00063814
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WBVar00063814 | Name | Public_name | WBVar00063814 | ||
---|---|---|---|---|---|
Other_name | pas24360 | ||||
haw106934 | |||||
cewivar00061338 | |||||
F14F3.1a.2:c.1064+9T>A | |||||
F14F3.1b.1:c.506+9T>A | |||||
F14F3.1a.1:c.1064+9T>A | |||||
F14F3.1c.1:c.587+9T>A | |||||
HGVSg | CHROMOSOME_X:g.10517710T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F14F3 | |
Flanking_sequences | acaactagattaaggtatggttctcgaatcggcgggcaaaatggaggagagaggaaaagatgagaaacaagcgatcatccggcaccatggattcatcattatccaatggaacgccaacgccaacgccgggatcagtgactggaagtaacatgacaaatccgattggatctccggccagcacgccgaatcgattcccttccaacaattcggcaaatctaccgacaacaaactttgtgcctcaaacgagtcagatgtatgctgggctcagtcagccagcaatggatccatattcgtaagtta | agatcaaaccatcatcaacggttatgaactatttataactttattagactaaaataaaattgtttttgtagtcaaatataatataatctacaccattcaacaatcaatggaaatttctcaatatttcagatttggaattgccaatggtttttcaatggctccatatccacaagtaacagatttccaaccacatcacatgttccaaggaagatcgccgtatgatttcccatatccaagaatgccgaccaatgggcatggtttccaacaatcaatgagtccggcaacaacggcggtaggagg | |||
Mapping_target | F14F3 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (38) | |||||
Laboratory | RW | ||||
Person | WBPerson6900 | ||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge | WBVar00082574 | |||
Status | Live | ||||
Affects | Gene | WBGene00006870 | |||
Transcript | F14F3.1c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1c.1:c.587+9T>A | ||||
Intron_number | 5/7 | ||||
F14F3.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1a.1:c.1064+9T>A | ||||
Intron_number | 11/13 | ||||
F14F3.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1a.2:c.1064+9T>A | ||||
Intron_number | 10/12 | ||||
F14F3.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1b.1:c.506+9T>A | ||||
Intron_number | 4/5 | ||||
Method | WGS_Pasadena_Quinlan |