WormBase Tree Display for Variation: WBVar00063809
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WBVar00063809 | Name | Public_name | WBVar00063809 | ||
---|---|---|---|---|---|
Other_name | pas24359 | ||||
cewivar00061337 | |||||
F14F3.1c.1:c.310-294C>T | |||||
F14F3.1a.1:c.787-294C>T | |||||
F14F3.1a.2:c.787-294C>T | |||||
F14F3.1b.1:c.229-294C>T | |||||
HGVSg | CHROMOSOME_X:g.10517130C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F14F3 | |
Flanking_sequences | cctgcccctggcattagcagcgcacgcgtagcaactagaaaatcaactaaaatgtcagagtgtcacaaaacgatgccatcatagcagcagtagcaggcattcttgtattcaagaggctctcttgtcactgtcttcatcacacttgaacttcctgccaatactttcttcgaaacctgttctcagtcccccattttcaccattcttgaaaagtggaaaggatggacagaaaaagtgtatgaaaggcaaggattgtttaaaaaaaatttaaaacaaaaaacatggaaggaatgcgtaatgatc | cgttttaagtgctagggaagttggttttttgtgtggcaaaactgcaaaggggttttgagattttaggatagaaacgatgcaaaaacgaagggcatttcccatttatctttatttgcgattctctgttcgtcttctttttcgacatatggacatagactcttcgtcttcgcacattcatctttctgttagttctgccagctgagaaaggttgggtcgggtggtttatatcaaacaattcaaatttcgaaatcaataatttcttcctatacaaaatatgtaacaactagattaaggtatggt | |||
Mapping_target | F14F3 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006870 | |||
Transcript | F14F3.1c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1c.1:c.310-294C>T | ||||
Intron_number | 4/7 | ||||
F14F3.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1a.1:c.787-294C>T | ||||
Intron_number | 10/13 | ||||
F14F3.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1a.2:c.787-294C>T | ||||
Intron_number | 9/12 | ||||
F14F3.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1b.1:c.229-294C>T | ||||
Intron_number | 3/5 | ||||
Method | WGS_Pasadena_Quinlan |