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WormBase Tree Display for Variation: WBVar00063809

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Name Class

WBVar00063809NamePublic_nameWBVar00063809
Other_namepas24359
cewivar00061337
F14F3.1c.1:c.310-294C>T
F14F3.1a.1:c.787-294C>T
F14F3.1a.2:c.787-294C>T
F14F3.1b.1:c.229-294C>T
HGVSgCHROMOSOME_X:g.10517130C>T
Sequence_detailsSMapS_parentSequenceF14F3
Flanking_sequencescctgcccctggcattagcagcgcacgcgtagcaactagaaaatcaactaaaatgtcagagtgtcacaaaacgatgccatcatagcagcagtagcaggcattcttgtattcaagaggctctcttgtcactgtcttcatcacacttgaacttcctgccaatactttcttcgaaacctgttctcagtcccccattttcaccattcttgaaaagtggaaaggatggacagaaaaagtgtatgaaaggcaaggattgtttaaaaaaaatttaaaacaaaaaacatggaaggaatgcgtaatgatccgttttaagtgctagggaagttggttttttgtgtggcaaaactgcaaaggggttttgagattttaggatagaaacgatgcaaaaacgaagggcatttcccatttatctttatttgcgattctctgttcgtcttctttttcgacatatggacatagactcttcgtcttcgcacattcatctttctgttagttctgccagctgagaaaggttgggtcgggtggtttatatcaaacaattcaaatttcgaaatcaataatttcttcctatacaaaatatgtaacaactagattaaggtatggt
Mapping_targetF14F3
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (18)
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006870
TranscriptF14F3.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14F3.1c.1:c.310-294C>T
Intron_number4/7
F14F3.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14F3.1a.1:c.787-294C>T
Intron_number10/13
F14F3.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14F3.1a.2:c.787-294C>T
Intron_number9/12
F14F3.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF14F3.1b.1:c.229-294C>T
Intron_number3/5
MethodWGS_Pasadena_Quinlan