WormBase Tree Display for Variation: WBVar00063764
expand all nodes | collapse all nodes | view schema
WBVar00063764 | Name | Public_name | WBVar00063764 | ||
---|---|---|---|---|---|
Other_name | pas24350 | ||||
cewivar00061326 | |||||
F14F3.6:n.104T>C | |||||
F14F3.1a.1:c.-86-506A>G | |||||
F14F3.8:n.302A>G | |||||
HGVSg | CHROMOSOME_X:g.10505396A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F14F3 | |
Flanking_sequences | cagaatttcaacattaggcggaattgaagtgaaacggagcgcaaagctaggaagaacattagctcatcgaaccgaatgtatattgcgcgtgtttcttctcagtctttttcggtgtaaatttactagcgacactcgctctcccttcaccatacacatattcctggctcttctgttaacattaaatgatggcaccaatgttaaggtatgtttcaaaagcacttggcatccccatcagtcttcagaagccctgactagccactgaccatcgtgcgagaggcggggcattggactacggtgcgc | tgacgtatgaaccaatagtagaaggcgtgcgattgaatgacacacacatacaccgattgcaaagcactttctatggttaaactaccttttgatccgggcttcttcgtaatattaatttaataaacttcatcacattaataaaaccgtttcaaaactattcaattttagagtgaaagctttctattttttattagtttgtttgcaaaggtcatcactgcttgatcgatttccttaatctcttatcaatagttatcagaaaaggtgcgacctttttgacacgctcgtcaaatcaagtgtatc | |||
Mapping_target | F14F3 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (38) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00195298 | |||
WBGene00006870 | |||||
WBGene00196814 | |||||
Transcript | F14F3.6 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.6:n.104T>C | ||||
cDNA_position | 104 | ||||
Exon_number | 1/1 | ||||
F14F3.8 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.8:n.302A>G | ||||
cDNA_position | 302 | ||||
Exon_number | 1/1 | ||||
F14F3.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F14F3.1a.1:c.-86-506A>G | ||||
Intron_number | 1/13 | ||||
Method | WGS_Pasadena_Quinlan |