WormBase Tree Display for Variation: WBVar00063454
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| WBVar00063454 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00063454 | |||
| Other_name | pas24288 | ||||
| haw106843 | |||||
| cewivar00061246 | |||||
| ZC504.5.1:c.387-342A>G | |||||
| HGVSg | CHROMOSOME_X:g.10404682T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | ZC504 | |
| Flanking_sequences | taaaataaatttgtgatgttagctttgtgattggtttccaataaaccttaatttccatgaaactaaagtcttattcaaaaaattagaaactagttcgtttttaggaaattgagactgtctagtaatgcaagtcaattaaacaagtcatatacgagataaaacaataaattaataaaatagactacagaaacgttcaaacaataattttccatcaatatttttttttggtttataatttatgaaaattgatttaccttctaatagtattgcgtgccatacgaattcccggaaatgttttcg | ggaatactattagactgtaagagactacaatactaagttttgatggtttgttccaaattggaagtaacttgtttttattaaggtatattcaacttgtgtgtgacactttttgaaacctcgaattggcatctagaaaatacctaattcgacgatttttttgtgacttagtaaggaatcctcaaaaatgaatgaagaatatcattaaatgttcatatcattaaaaatattgtttagagattgcaattcttatgggtacaccatactaataggaaacacatatctttaaaaaattgttcgatc | |||
| Mapping_target | ZC504 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (138) | |||||
| Laboratory | QX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00082483 | |||
| WBVar01470811 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001804 | |||
| Transcript | ZC504.5.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZC504.5.1:c.387-342A>G | ||||
| Intron_number | 5/13 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
