WormBase Tree Display for Variation: WBVar00059390
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| WBVar00059390 | Name | Public_name | WBVar00059390 | ||
|---|---|---|---|---|---|
| Other_name | pas23475 | ||||
| cewivar00107102 | |||||
| CE39588:p.Asn20= | |||||
| CE25042:p.Asn198= | |||||
| K04G7.3b.1:c.60C>T | |||||
| K04G7.3a.1:c.594C>T | |||||
| HGVSg | CHROMOSOME_III:g.7150531G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | K04G7 | |
| Flanking_sequences | cctgaagaattaataaaactaattattactaaaaacgagaaatgttcttaccttcgcttcttcaagtcttcccattgcttttagtaagtttccaagatcacttctgacacaatacaaatcaggattaatttgtaaagcattgaaatatgctgtgacagcttgctccaaatcaccaccagacaccaaagctgcggctaaattgatataagcatcaatgaattctggcttgagtttaacagctagtttgtagttttcaagtgcatcctgtagttgtcctttctctttatagtaatttccaag | ttactgtaggcttctgcacactgattattgactttgatggctaacattgaatattgcattgatctgaaaatagatgtccataaaaagaaacactggagtaaaaactcacttttccaaatttttagtttggaaattgatggctgagaggagcaatagcgttggcaagttatttgggtcactttgaaaaaccaaattgcaatatttctctgcttccacataatttcctgattgaaactgccgatgagccaattcagtgactttttctgtaaaccaatttatattttcaattgttcaaaatta | |||
| Mapping_target | K04G7 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (30) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01446531 | |||
| WBVar01446532 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003858 | |||
| Transcript | K04G7.3a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K04G7.3a.1:c.594C>T | ||||
| HGVSp | CE25042:p.Asn198= | ||||
| cDNA_position | 621 | ||||
| CDS_position | 594 | ||||
| Protein_position | 198 | ||||
| Exon_number | 6/15 | ||||
| Codon_change | aaC/aaT | ||||
| Amino_acid_change | N | ||||
| K04G7.3b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | K04G7.3b.1:c.60C>T | ||||
| HGVSp | CE39588:p.Asn20= | ||||
| cDNA_position | 60 | ||||
| CDS_position | 60 | ||||
| Protein_position | 20 | ||||
| Exon_number | 1/9 | ||||
| Codon_change | aaC/aaT | ||||
| Amino_acid_change | N | ||||
| Method | WGS_Pasadena_Quinlan |
