WormBase Tree Display for Variation: WBVar00057261

WBVar00057261 Name: Public_name: WBVar00057261
    Other_name: pas3727
      haw42574
      haw142949
      cewivar00106063
      C48D5.2a.1:c.2117-72C>T
      C48D5.2c.1:c.806-72C>T
      C48D5.2b.1:c.911-72C>T
    HGVSg: CHROMOSOME_III:g.3608922C>T
  Sequence_details: SMap: S_parent: Sequence: C32A3
    Flanking_sequences: taaaaattatccaatatgttttttt tgaaattttttaagctttttaccgg
    Mapping_target: C32A3
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (77)
    Laboratory: RW
      QX
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
      WGS_Andersen
    History: Acquires_merge: WBVar00562814
        WBVar00098868
        WBVar01445016
        WBVar01262154
    Status: Live
  Affects: Gene: WBGene00004213
    Transcript: C48D5.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48D5.2c.1:c.806-72C>T
        Intron_number: 6/10
      C48D5.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48D5.2b.1:c.911-72C>T
        Intron_number: 6/11
      C48D5.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48D5.2a.1:c.2117-72C>T
        Intron_number: 13/18
  Reference: WBPaper00038208
    WBPaper00040707
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw42574
  Method: WGS_Hawaiian_Waterston