WormBase Tree Display for Variation: WBVar00051851
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| WBVar00051851 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00051851 | |||
| Other_name | pas21967 | ||||
| haw105324 | |||||
| cewivar00058872 | |||||
| F45E1.7a.1:c.-1-2376A>T | |||||
| F45E1.7b.1:c.18-2376A>T | |||||
| HGVSg | CHROMOSOME_X:g.7995185T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F45E1 | |
| Flanking_sequences | aacaatacaaccaaagactgaaatataactaaaactgtaggtagggaaaattgaacttcgggaaaaacagaaattgtttttaaattgtttatttatatgtagaaaacatctgaatgtgcactacatttgtcgttttctttttttttgaatttttgacctaaaataattcccaaaactgacacaaaaatataatgtagtgagacagttttgacatacgggaaatatttgttatttttacaagaatacaattctagaacacaaaattaagtatagcaccctatggcgaaatttgaaaaaaag | atttgttttgattttgaaaaacagggaatcaaaatttgaattcaaaattccatacaggaatatgaaaccttgacagctgattggtgaaaagagtgagtgaaaaccgaataaaaacaaaaacatgtattcatccgttgcttaacgtaattgaacaacggactttttgaccaatgtcctagaagattgcctaacaagttactaatggcatacacttgaaagaccaacactatcggaaaatatgtacaagttaaagcgaccagaatcagattccattctaacgcaacttatttgatagatatg | |||
| Mapping_target | F45E1 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (168) | |||||
| Laboratory | QX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00080964 | |||
| WBVar01469926 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00018467 | |||
| Transcript | F45E1.7b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E1.7b.1:c.18-2376A>T | ||||
| Intron_number | 1/10 | ||||
| F45E1.7a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45E1.7a.1:c.-1-2376A>T | ||||
| Intron_number | 1/12 | ||||
| Reference | WBPaper00040707 | ||||
| Method | WGS_Pasadena_Quinlan |
