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WormBase Tree Display for Variation: WBVar00051016

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Name Class

WBVar00051016NamePublic_nameWBVar00051016
Other_namepas21800
haw105147
cewivar00058653
C54D2.5a.2:c.-76-479T>C
C54D2.5a.1:c.-76-479T>C
HGVSgCHROMOSOME_X:g.7861786A>G
Sequence_detailsSMapS_parentSequenceC54D2
Flanking_sequencesacgatgagaaagggctgaaatttgagcatttttcgaaacccccaagaatttagaaatcaacaagatgtatcctcgagataagcacaaaaagagcaaaatggagaagagtcgaacagcgcaaaaaataaagagggaagcagaaaacgcagcagatttttaaaccggaaagccgcaataacattgaacgcataattgatgagtaagtagagtagagtaaaggtggcatgattttaagtttttgatgaaaacgagcaaagaaaaaagattcaagattaattgtgaagcgaaatttgtcatacgcaataaaaaagacaagacattgggaaagaagcgatagaagaaacaagtgagttttgtgtgtatgtgtatgtgtagaaaaatagatgatggagaccagagcggaagaaattagacgatttcggttggttggttgaatatgcggcgctctgcgagcatgaatctgctctgcttatagtatatgaattgtccgatgatattatttcagtttttagggggtgatgagagacgaacgtgtgaatgcgccaataggggagaacaatacacgagagccacacaattttgcttcataatttgagaatt
Mapping_targetC54D2
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (34)
LaboratoryRW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00080787
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.-76-479T>C
Intron_number1/31
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.-76-479T>C
Intron_number2/32
MethodWGS_Pasadena_Quinlan