WormBase Tree Display for Variation: WBVar00049781
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| WBVar00049781 | Name | Public_name | WBVar00049781 | ||
|---|---|---|---|---|---|
| Other_name | pas21553 | ||||
| cewivar00058273 | |||||
| F08C6.2a.1:c.20+830A>T | |||||
| F08C6.7.1:c.213+18T>A | |||||
| HGVSg | CHROMOSOME_X:g.7573206A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F08C6 | |
| Flanking_sequences | taaaaacaataaaacaaacctgttgatcactgccatccaaagcaccgccactcgattttgttggagtttgagcacttgaacttccgacctacaataatttacttgatgcttttaaaatcaaattaggatggcgctgttttaaagtatttaagcgttttcagacactattcagataattcaacattttttcacttgtatccaagggttgaaaaatgtcagtatgaatccaatcttaaaaacatttaaaaaaatttgccttaaaacctatcaaacatttcaatctctgaaattctttttttt | aattttaccaaactcacatatgcttcaactgttggggcaacaactttcatgatctctttgggcttttccttatttccattttctgacgattctccattgatgccgaaggtttctagaccatgaaccatctggaaggtatttttttaatcatttcgcaatacagacacccccgcgtttttctccggtttttccgtcatctctcggtttctctaactcacttcattgttcttcacggacatcttggcaagatcacaggcattcatcaactcttcgaagtcatctctttcctttcttgcctaa | |||
| Mapping_target | F08C6 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006827 | |||
| WBGene00017241 | |||||
| Transcript | F08C6.7.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08C6.7.1:c.213+18T>A | ||||
| Intron_number | 4/8 | ||||
| F08C6.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F08C6.2a.1:c.20+830A>T | ||||
| Intron_number | 1/6 | ||||
| Method | WGS_Pasadena_Quinlan |
