WormBase Tree Display for Variation: WBVar00047976
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| WBVar00047976 | Name | Public_name | WBVar00047976 | ||
|---|---|---|---|---|---|
| Other_name | pas21192 | ||||
| cewivar00057671 | |||||
| T10A3.1e.1:c.1421+118C>T | |||||
| T10A3.1c.1:c.1421+118C>T | |||||
| T10A3.1a.1:c.1421+118C>T | |||||
| T10A3.1f.1:c.1421+118C>T | |||||
| T10A3.1d.1:c.1421+118C>T | |||||
| T10A3.1b.1:c.1421+118C>T | |||||
| HGVSg | CHROMOSOME_X:g.7277186G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | K03A1 | |
| Flanking_sequences | atcttcaaagtgttaccaccgcctccagcaataatatcctcttcagaagatgacattgatcgaagttgccttcaaacaattactttgaacaaataaaatgaagaagaatgtatgacaaaaaatgcagtttatgtgaaattgaactactgatgaagagcgaaaaaagctaaatgaggcaatgctcattaaaaatttgcattgaaaccgaaaggcgctcttctggtttctgttttgctgttggtttgactaaaaaagtgatcagcagaacaaaaaggaagtcatgctaaataatgagaaaat | gagacgtaactggaagagggaaagcaatgaactcaaagcttgagcacttagtacaaaaaagacattactcaattgagtttgtctattttttccattagccaaattacacttgctcacctatgcaatcgatttttcacccggttcaaatggtcgtcagtagaaggacatgctcgcacgccttgcgtgttggactgactctgtgaagagttgttccgctctgaaattgattctcaaaatagaatttagcaaggtattatcgatatgatatcatcttacgtttcttagattcgaagtttgacg | |||
| Mapping_target | K03A1 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (27) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006750 | |||
| Transcript | T10A3.1c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T10A3.1c.1:c.1421+118C>T | ||||
| Intron_number | 11/28 | ||||
| T10A3.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T10A3.1d.1:c.1421+118C>T | ||||
| Intron_number | 11/27 | ||||
| T10A3.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T10A3.1e.1:c.1421+118C>T | ||||
| Intron_number | 11/27 | ||||
| T10A3.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T10A3.1b.1:c.1421+118C>T | ||||
| Intron_number | 11/27 | ||||
| T10A3.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T10A3.1a.1:c.1421+118C>T | ||||
| Intron_number | 12/27 | ||||
| T10A3.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T10A3.1f.1:c.1421+118C>T | ||||
| Intron_number | 11/26 | ||||
| Method | WGS_Pasadena_Quinlan |
