WormBase Tree Display for Variation: WBVar00047540
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| WBVar00047540 | Name | Public_name | WBVar00047540 | |||
|---|---|---|---|---|---|---|
| Other_name | haw90606 | |||||
| cewivar00256948 | ||||||
| F47H4.11.1:c.103C>G | ||||||
| CE50217:p.Gln35Glu | ||||||
| HGVSg | CHROMOSOME_V:g.17351604G>C | |||||
| Sequence_details | SMap | S_parent | Sequence | F47H4 | ||
| Flanking_sequences | tagaaggaaattttaatttcatttt | ttctattttaatgagtagagataca | ||||
| Mapping_target | F47H4 | |||||
| Type_of_mutation | Substitution | G | C | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Predicted_SNP | ||||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | ||||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | RW | |||||
| Person | WBPerson1562 | |||||
| Analysis | WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | ||||||
| Status | Live | |||||
| Affects | Gene | WBGene00009841 | ||||
| Transcript | F47H4.11.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | |||||
| SIFT | 1 | tolerated_low_confidence | ||||
| PolyPhen | 0.001 | benign | ||||
| HGVSc | F47H4.11.1:c.103C>G | |||||
| HGVSp | CE50217:p.Gln35Glu | |||||
| cDNA_position | 103 | |||||
| CDS_position | 103 | |||||
| Protein_position | 35 | |||||
| Exon_number | 2/3 | |||||
| Codon_change | Caa/Gaa | |||||
| Amino_acid_change | Q/E | |||||
| Remark | [20081124 db] this Variation was previously named hw90606 | |||||
| Method | WGS_Hawaiian_Waterston |
