WormBase Tree Display for Variation: WBVar00046186
expand all nodes | collapse all nodes | view schema
| WBVar00046186 | Name | Public_name | WBVar00046186 | ||
|---|---|---|---|---|---|
| Other_name | pas20834 | ||||
| haw42589 | |||||
| haw142959 | |||||
| cewivar00106079 | |||||
| C32A3.1b.1:c.784-45T>C | |||||
| C32A3.1a.1:c.850-45T>C | |||||
| HGVSg | CHROMOSOME_III:g.3614477A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C32A3 | |
| Flanking_sequences | gctgcctcctttgctgttcaattcgttgcatttcctgttgctgttgctgcatcaatctcatcttattttgctgctgttgaagctgagcaatgtgttgtggattctgagctggtggtggagccgtcgacggcatccgatcgccattcatttccatcggagactgcttcgttggtgattcggaggatgaaaagtccagttcggctagaaatgtgtcgtaggtatccggacccaatattgtatcaacattgtattgctcctggaaaacgtaaaaattagaattaaaattgagaaccagcgaaa | gaattcgatttttcgaaaaaaaaactttaaatttttttctgaattttttaaaaattttctaaacttcttttccgatttttcaatattcaggaaaatcgaaaaaaatgtcatttttcgatttatttttttgaaaaatcggacttttttcgatgacatccttgtcattggggaatttttttaaagaatgtttgctaatatcaccaattatcacagtaaaaatttttttaaaacattttaaaattattttatttactttcaaaaagtggtgaaaactcagttaaaacctgcagcaatgctcga | |||
| Mapping_target | C32A3 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (90) | |||||
| Laboratory | QX | ||||
| AX | |||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00562824 | |||
| WBVar01445022 | |||||
| WBVar00057336 | |||||
| WBVar01262171 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004765 | |||
| Transcript | C32A3.1a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C32A3.1a.1:c.850-45T>C | ||||
| Intron_number | 5/7 | ||||
| C32A3.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C32A3.1b.1:c.784-45T>C | ||||
| Intron_number | 4/6 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
