WormBase Tree Display for Variation: WBVar00041791
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WBVar00041791 | Name | Public_name | WBVar00041791 | ||
---|---|---|---|---|---|
Other_name | pas19955 | ||||
cewivar00081848 | |||||
F36H5.3b.1:c.950+27A>G | |||||
F36H5.3a.1:c.950+27A>G | |||||
HGVSg | CHROMOSOME_II:g.1764536A>G | ||||
Sequence_details | SMap | S_parent | Sequence | F36H5 | |
Flanking_sequences | acgtcgggcgatgatcactttatcaaatgggaggatctgataaggaattattcaatcgacgatagtgtaacagtgatagctcgcgtgcaaatcactagcttgaaaagtaagtagtaggctctgactagaaataattttcacgtttaggatcattcatgaaggaagggcccatttcaaagagtttcgtgatctctcaacaattcggtggcatttctagcgtcttggaaggtgaaactctcataggcagtgaggagaagagattcaatattccgtggtatgttattttagaatcttagtttt | gcagaagctcgtgagaaggcacttggcgggtgtaggagatgataaaggcagacaggcattctcatgcctaacttcaggcgacagaaccgagacgcatttttgccgaggctcagtttccgattcaaatcttattttcaggacaataaaaatgcaacgcaggtcgggatttgtcgtgatttttctatattgtcggagaaaatcctatccacatcaaatttggacggtttacgcgaaatgctggttcaagttggtgtcagccaacgggaaaagtttgatgagacttcaaaatgctgtttttca | |||
Mapping_target | F36H5 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00018102 | |||
Transcript | F36H5.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F36H5.3b.1:c.950+27A>G | ||||
Intron_number | 5/11 | ||||
F36H5.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F36H5.3a.1:c.950+27A>G | ||||
Intron_number | 5/12 | ||||
Method | WGS_Pasadena_Quinlan |