WormBase Tree Display for Variation: WBVar00040261
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| WBVar00040261 | Name | Public_name | WBVar00040261 | ||
|---|---|---|---|---|---|
| Other_name | pas19649 | ||||
| haw18288 | |||||
| haw125280 | |||||
| cewivar00081259 | |||||
| C08E3.4:n.35A>T | |||||
| HGVSg | CHROMOSOME_II:g.1607569T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C08E3 | |
| Flanking_sequences | cgccaggcacaaatgtttgtttttcgaagtcctcgccgtttttggcaaagtaggtaacctcacatcctatatcattttgccgatattcgaatttggtacttgtgtattatttcccctcaaaaatattcaaaaaatcacattctattgtagttcaagtcatgatttccgttcttaaatcgatagaaccagaattcaaaatcagcaaatcccatgacgtcatttccaactttcctacaaaaattgtcgaaagactctttaattgattttttgtcgagaacttcgtagagaatacatgtacgg | tagtgagctcactttggcaaagagcaacagacatttggaattattacctgaaaatttgaatttttagaagcaaaaaaatgtgttaattaaaactggaataactattttgaacagaaaaagaacggttaacggttctgaagagtttaccacattaaaattgaattctctgttgataagaagaattctctttttcgaaactgataacaatgcacaaacatttgatttcacaagagacagggaagtttgttgaatgaaattgattattgacaaatagtgaccaaaaaccactatttaaactat | |||
| Mapping_target | C08E3 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (15) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar01360804 | |||
| WBVar00165038 | |||||
| WBVar01295566 | |||||
| WBVar00545145 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015596 | |||
| Pseudogene | C08E3.4 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C08E3.4:n.35A>T | ||||
| cDNA_position | 35 | ||||
| Exon_number | 1/2 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
