WormBase Tree Display for Variation: WBVar00039050
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WBVar00039050 | Evidence | Paper_evidence | WBPaper00038208 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00039050 | ||||
Other_name | haw88908 | |||||
haw174107 | ||||||
cewivar00252931 | ||||||
CE42997:p.Glu240Lys | ||||||
Y32B12B.2a.1:c.718G>A | ||||||
HGVSg | CHROMOSOME_V:g.16539279G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y32B12B | ||
Flanking_sequences | atttccagaatttgaagttttaaag | aattttcgaatttggaaaagtttta | ||||
Mapping_target | Y32B12B | |||||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
WBPerson4037 | ||||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar00593972 | ||||
Status | Live | |||||
Affects | Gene | WBGene00012522 | ||||
Transcript | Y32B12B.2a.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.48 | tolerated | ||||
PolyPhen | 0.012 | benign | ||||
HGVSc | Y32B12B.2a.1:c.718G>A | |||||
HGVSp | CE42997:p.Glu240Lys | |||||
cDNA_position | 728 | |||||
CDS_position | 718 | |||||
Protein_position | 240 | |||||
Exon_number | 5/13 | |||||
Codon_change | Gaa/Aaa | |||||
Amino_acid_change | E/K | |||||
Reference | WBPaper00038208 | |||||
Remark | [20081124 db] this Variation was previously named hw88908 | |||||
Method | WGS_Hawaiian_Waterston |